chromium single cell multiome platform Search Results


chromium single cell multiome atac + gene expression protocol  (Integragen sa)
90
Integragen sa chromium single cell multiome atac + gene expression protocol
Chromium Single Cell Multiome Atac + Gene Expression Protocol, supplied by Integragen sa, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/chromium+single+cell+multiome+platform/chromium+single+cell+multiome+atac+++gene+expression+protocol/pm38311851-222-3-8
Average 90 stars, based on 1 article reviews
chromium single cell multiome atac + gene expression protocol - by Bioz Stars, 2026-11
90/100 stars
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chromium next gem single cell multiome atac + gene expression user guide cg000338  (REVA Medical)
90
REVA Medical chromium next gem single cell multiome atac + gene expression user guide cg000338
Chromium Next Gem Single Cell Multiome Atac + Gene Expression User Guide Cg000338, supplied by REVA Medical, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/chromium+single+cell+multiome+platform/chromium+next+gem+single+cell+multiome+atac+++gene+expression+user+guide+cg000338/pm38755155-220-17-30
Average 90 stars, based on 1 article reviews
chromium next gem single cell multiome atac + gene expression user guide cg000338 - by Bioz Stars, 2026-11
90/100 stars
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single cell cnv sccnv assay  (10X Genomics)
86
10X Genomics single cell cnv sccnv assay
( A ) Banked cryopreseved aGBM samples were used for both scATAC and WGS. Nuclei were isolated from the samples, mixed, and used for both scATAC and WGS. ( B to D ) Percent of chromosome arm-level gains, chromosome arm-level losses, and focal amplifications detected in aGBM samples identified using both methods versus CNVs detected by scATAC or WGS alone. ( E ) Banked frozen pGBM samples were used for both scATAC and WGS. ( F and G ) Number of chromosome arm-level gains and losses detected in pGBM samples identified using both methods versus total numbers of gains detected by scATAC or WGS. ( H ) Fresh MM samples were used for both scATAC and 10x <t>scCNV</t> DNA analysis. ( I and J ) Number of chromosome arm-level gains and losses detected by both methods versus total numbers of gains detected by scATAC or 10x scCNV analysis. ( K ) Overview of raw transformed z -score profiles for four aGBM samples.
Single Cell Cnv Sccnv Assay, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/chromium+single+cell+multiome+platform/assay+cell+chromium+multiome+single/pmc08514091-49-10-14
Average 86 stars, based on 1 article reviews
single cell cnv sccnv assay - by Bioz Stars, 2026-11
86/100 stars
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( A ) Banked cryopreseved aGBM samples were used for both scATAC and WGS. Nuclei were isolated from the samples, mixed, and used for both scATAC and WGS. ( B to D ) Percent of chromosome arm-level gains, chromosome arm-level losses, and focal amplifications detected in aGBM samples identified using both methods versus CNVs detected by scATAC or WGS alone. ( E ) Banked frozen pGBM samples were used for both scATAC and WGS. ( F and G ) Number of chromosome arm-level gains and losses detected in pGBM samples identified using both methods versus total numbers of gains detected by scATAC or WGS. ( H ) Fresh MM samples were used for both scATAC and 10x scCNV DNA analysis. ( I and J ) Number of chromosome arm-level gains and losses detected by both methods versus total numbers of gains detected by scATAC or 10x scCNV analysis. ( K ) Overview of raw transformed z -score profiles for four aGBM samples.

Journal: Science Advances

Article Title: Copy-scAT: Deconvoluting single-cell chromatin accessibility of genetic subclones in cancer

doi: 10.1126/sciadv.abg6045

Figure Lengend Snippet: ( A ) Banked cryopreseved aGBM samples were used for both scATAC and WGS. Nuclei were isolated from the samples, mixed, and used for both scATAC and WGS. ( B to D ) Percent of chromosome arm-level gains, chromosome arm-level losses, and focal amplifications detected in aGBM samples identified using both methods versus CNVs detected by scATAC or WGS alone. ( E ) Banked frozen pGBM samples were used for both scATAC and WGS. ( F and G ) Number of chromosome arm-level gains and losses detected in pGBM samples identified using both methods versus total numbers of gains detected by scATAC or WGS. ( H ) Fresh MM samples were used for both scATAC and 10x scCNV DNA analysis. ( I and J ) Number of chromosome arm-level gains and losses detected by both methods versus total numbers of gains detected by scATAC or 10x scCNV analysis. ( K ) Overview of raw transformed z -score profiles for four aGBM samples.

Article Snippet: Third, we benchmarked Copy-scAT against CNV calls made with the single-cell CNV (scCNV) assay (10x Genomics) using MM clinical samples ( n = 10 samples, 44,161 cells) ( , and fig. S4).

Techniques: Isolation, Transformation Assay